All samples trajectory
## [1] "Anno1"
## [1] "Anno2"
| 1 | 2 | 3 | 4 | 5 | 6 | 7 | |
|---|---|---|---|---|---|---|---|
| ACE2+ Proximal EC | 7 | 101 | 136 | 1036 | 0 | 186 | 47 |
| BEST4 EC | 152 | 4 | 0 | 15 | 183 | 106 | 27 |
| Distal EC progenitor | 511 | 0 | 0 | 0 | 10 | 0 | 0 |
| Distal-EC2 | 1 | 0 | 0 | 0 | 3 | 31 | 0 |
| Early Distal-EC | 380 | 0 | 0 | 2 | 37 | 2 | 0 |
| Early Proximal-EC | 1358 | 31 | 0 | 99 | 189 | 24 | 764 |
| Int Distal-EC | 34 | 1 | 0 | 7 | 40 | 33 | 2 |
| Int Proximal-EC | 248 | 945 | 722 | 2052 | 443 | 834 | 993 |
| Mature Distal-EC | 4 | 1 | 1 | 7 | 6 | 43 | 4 |
| Mature Proximal-EC | 111 | 471 | 1182 | 5530 | 288 | 4101 | 242 |
| Microfold | 12 | 9 | 7 | 368 | 21 | 609 | 8 |
| MT-low Mature Proximal-EC | 6 | 9 | 86 | 2426 | 63 | 8920 | 3 |
| Proximal EC progenitor | 1460 | 0 | 0 | 0 | 18 | 0 | 0 |
| Stem | 755 | 0 | 0 | 0 | 9 | 0 | 0 |
| TA | 1356 | 0 | 0 | 1 | 60 | 6 | 1 |
## [1] "Anno1"
## [1] "Anno2"
## [1] "Inf status"
## [1] "Stem"
Healthy trajectory
## [1] "Anno1"
## [1] "Anno2"
| 1 | 2 | 3 | 4 | 5 | |
|---|---|---|---|---|---|
| ACE2+ Proximal EC | 508 | 495 | 14 | 1 | 55 |
| BEST4 EC | 27 | 11 | 2 | 54 | 212 |
| Distal EC progenitor | 0 | 0 | 0 | 0 | 22 |
| Early Distal-EC | 0 | 0 | 0 | 0 | 27 |
| Early Proximal-EC | 17 | 226 | 6 | 17 | 847 |
| Int Proximal-EC | 815 | 1675 | 66 | 112 | 365 |
| Mature Distal-EC | 0 | 1 | 0 | 0 | 1 |
| Mature Proximal-EC | 3776 | 2300 | 45 | 42 | 93 |
| Microfold | 211 | 52 | 1 | 5 | 0 |
| MT-low Mature Proximal-EC | 6101 | 259 | 4 | 3 | 9 |
| Proximal EC progenitor | 0 | 0 | 0 | 0 | 789 |
| Stem | 0 | 0 | 0 | 0 | 348 |
| TA | 1 | 0 | 0 | 2 | 383 |
## [1] "Anno1"
## [1] "Anno2"
## [1] "Stem"
## [1] "EC markers"
non-Inf trajectory
## [1] "Anno1"
## [1] "Anno2"
| 1 | 2 | 3 | |
|---|---|---|---|
| ACE2+ Proximal EC | 215 | 278 | 62 |
| BEST4 EC | 38 | 2 | 173 |
| Distal EC progenitor | 0 | 0 | 426 |
| Distal-EC2 | 36 | 0 | 5 |
| Early Distal-EC | 1 | 0 | 369 |
| Early Proximal-EC | 15 | 207 | 857 |
| Int Distal-EC | 24 | 2 | 123 |
| Int Proximal-EC | 502 | 1695 | 996 |
| Mature Distal-EC | 52 | 3 | 20 |
| Mature Proximal-EC | 2443 | 2583 | 934 |
| Microfold | 677 | 115 | 135 |
| MT-low Mature Proximal-EC | 4343 | 664 | 114 |
| Proximal EC progenitor | 0 | 0 | 628 |
| Stem | 0 | 0 | 340 |
| TA | 4 | 0 | 897 |
## [1] "Anno1"
## [1] "Anno2"
## [1] "Stem"
## [1] "EC markers"
Inf trajectory
## [1] "Anno1"
## [1] "Anno2"
| 1 | 2 | 3 | 4 | 5 | |
|---|---|---|---|---|---|
| ACE2+ Proximal EC | 43 | 0 | 0 | 0 | 0 |
| BEST4 EC | 9 | 1 | 3 | 3 | 1 |
| Distal EC progenitor | 2 | 0 | 1 | 185 | 12 |
| Early Distal-EC | 2 | 0 | 8 | 113 | 25 |
| Early Proximal-EC | 46 | 44 | 357 | 110 | 16 |
| Int Proximal-EC | 197 | 429 | 53 | 0 | 0 |
| Mature Distal-EC | 2 | 0 | 4 | 1 | 0 |
| Mature Proximal-EC | 646 | 242 | 3 | 0 | 0 |
| Microfold | 93 | 1 | 3 | 0 | 0 |
| MT-low Mature Proximal-EC | 1103 | 10 | 1 | 0 | 0 |
| Proximal EC progenitor | 0 | 0 | 2 | 115 | 6 |
| Stem | 0 | 0 | 1 | 109 | 30 |
| TA | 0 | 0 | 3 | 397 | 27 |
## [1] "Anno1"
## [1] "Anno2"
## [1] "Stem"
## [1] "EC markers"
All samples trajectory
## [1] "Anno1"
## [1] "Anno2"
| 1 | 2 | 3 | 4 | 5 | |
|---|---|---|---|---|---|
| AC-Goblet | 64 | 181 | 334 | 5 | 7 |
| Early AC-goblet | 1 | 18 | 215 | 3 | 3 |
| Early TI-Goblet | 21 | 240 | 570 | 12 | 4 |
| Stem | 0 | 19 | 907 | 18 | 1 |
| TA | 3 | 45 | 1678 | 138 | 21 |
| TI-Goblet | 4425 | 425 | 38 | 2 | 156 |
| TI-Goblet2 | 1 | 16 | 22 | 168 | 1148 |
## [1] "Anno1"
## [1] "Anno2"
## [1] "Inf status"
## [1] "Goblet"
## [1] "Goblet cluster markers"
All samples trajectory
## [1] "Anno1"
## [1] "Anno2"
| 1 | 2 | 3 | 4 | 5 | |
|---|---|---|---|---|---|
| EEC | 651 | 15 | 5 | 5 | 18 |
| Paneth | 566 | 5 | 2 | 1 | 23 |
| Stem | 11 | 9 | 0 | 11 | 914 |
| TA | 120 | 109 | 116 | 1504 | 36 |
| Tuft | 376 | 9 | 5 | 3 | 20 |
## [1] "Anno1"
## [1] "Anno2"
## [1] "Inf status"
## [1] "Stem"